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Can we trust docking results?
Sept 2010

IBM Systems and Technology Group releases a white paper with eHiTS and Cell
Oct 2008

EPA's ToxCastTM project will use SimBioSys' eHiTS as docking engine
Nov, 2007

[Events]

240th ACS
Aug 22-26, 2010
Boston, MA, USA
booth #945
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Index

SPROUT

Benefit Highlights


Covalent Target Site
  • Covalent Ligand Binding
Sprout's HIPPO module is uniquely able to recognize specific catalytic patterns and suggest covalent interaction sites accordingly. 
Interaction Surface
  • Special Ligand Interaction Surface 
More sophisticated than double VDW, Sprout generates a VDW + probe radius varied by interaction type (lipo, polar, H-bond, covalent) as presented at the York MGMS conference in 1995. 
Tolerance Control
  • Controllability 
Powerfully, users are able to run components automatically or maintain control to guide and modify each decision of every module for maximum versatility.Customers have chosen SPROUT over other de novo programs for much greater control of the search.
Surface interaction by type
  • Excellent Interaction Visualization 
Sprout's surface representations are colour coded according to interaction type and not by atom type. Target site interaction regions can be visualized with tolerances. Clients often use SPROUT for visualization even during tasks that are not de novo design related (e.g. lead optimisation), because it visualizes the receptor-ligand interactions better than any other tool available.
Search Space
  • Search Space Continuum 
As opposed to the discrete sampling of interaction points found in other tools, the interaction regions are represented and the space is searched continously.
Exhaustive search
  • Systematic, Exhaustive Search 
Guarantees that all possible solutions will be found within the limits defined by the constraints and parameters. In contrast, other de novo packages are limited by random number generators and linker fragment DBs. 
  • Specific Library for Peptide Generation 
Specific library to quickly generate peptides only. The use of this library is optional, i.e. the program can be still used with the standard library to generate a wide variety of small molecule drug candidates. 


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